MirGeneDB 3.0
MirGeneDB ID

Bpl-Mir-12597

Family name MIR-12597 (all species)
Seed UGCACAA
Species Monogonont Rotifer 1 (Brachionus plicatilis)
MiRBase ID
Paralogues
Orthologues Ava-Mir-12597  Bko-Mir-12597 
Node of Origin (locus) Rotifera
Node of Origin (family) Rotifera
Genome context
(Bpl_ASM1027981)		 QEOQ01000070.1: 152998-153059 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUUAAAAUCACAUUCCAAAACCAAAUUUUAUUGCACAAUCUACAUUGGACCUUAGUUUGACAGGACAGGUCUCUUGUACAUUUGUGCAGGUAAAAUUUUGACUGAAGCUCGUCCAUCAAAUA
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Structure
        10        20          30         40         50         
CUUAAAAUCACAUUCCAAAACC--        -        UC-|   UU      UAGUUU 
                        AAAUUUUA UUGCACAA   UACA  GGACCU      G
                        UUUAAAAU GACGUGUU   AUGU  UCUGGA      A
AUAAACUACCUGCUCGAAGUCAGU        G        UAC^   UC      CAGGAC 
120       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Bpl-Mir-12597_5p
mirBase accessionNone
Sequence 
0- UUGCACAAUCUACAUUGGACCU -22
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Star sequence

Bpl-Mir-12597_3p*
mirBase accessionNone
Sequence 
38- GUCUCUUGUACAUUUGUGCAGGUA -62
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