| MirGeneDB ID | Bta-Mir-2387 |
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| Family name |
MIR-2387 (all species) |
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| Seed |
GGAAGGC |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-2387
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| Paralogues |
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| Orthologues |
Cfa-Mir-2387
Cpo-Mir-2387
Mmr-Mir-2387
Ocu-Mir-2387
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| Node of Origin (locus) |
Boreoeutheria
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| Node of Origin (family) |
Boreoeutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037352.1: 32930353-32930407 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAGGCCGGCUAGGCCCGAGCGUGGAGGGCCUGGAAGGCCUGGCUUUGCAGCGUGGACUGGACCCUGCAGACCCGGCCUUGGCAAGCCCUUCCGCUGACGUCUCCACGGCCGGAGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GAGGCCGGCUAGGCCCG---| U C G- U C C GGA
AGCG GGAGGGC UG AAGGCC GG UUUGCAG GU \
UCGC CUUCCCG AC UUCCGG CC AGACGUC CA C
CGAGGCCGGCACCUCUGCAG^ - A GG C - C GGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-2387_5p |
| mirBase accession | MIMAT0011939 |
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| Sequence |
0- UGGAAGGCCUGGCUUUGCAGCGU -23
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-2387
|
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| Star sequence |
Bta-Mir-2387_3p* |
| mirBase accession | None |
|---|
| Sequence |
32- CCUGCAGACCCGGCCUUGGCAAG -55
Get sequence
|
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