MirGeneDB 3.0

MirGeneDB ID

Cfa-Mir-2387

Family name MIR-2387 (all species)
Seed GGAAGGC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-2387
Paralogues
Orthologues Bta-Mir-2387  Cpo-Mir-2387  Mmr-Mir-2387  Ocu-Mir-2387 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(canFam3_add)
chr6: 5910334-5910388 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGAGGCCGGCCAGGCGGAGCGUGGAGGGCCUGGAAGGCCUGGCUUUGCAGCGUGUUCUGGACUCUGCAGACCCGGCCUUGGCAAGCUCUUCCGCUGACGUCCCCGCGGCCGGAGC
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Structure
        10           20        30         40        50       
AGAGGCCGGCCAGGCGG---|   U       C  G-      U  C       C  GUU 
                    AGCG GGAGGGC UG  AAGGCC GG UUUGCAG GU   \
                    UCGC CUUCUCG AC  UUCCGG CC AGACGUC CA   C
CGAGGCCGGCGCCCCUGCAG^   -       A  GG      C  -       U  GGU 
   110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-2387_5p

mirBase accessionNone
Sequence
0- UGGAAGGCCUGGCUUUGCAGCGU -23
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Star sequence

Cfa-Mir-2387_3p*

mirBase accessionMIMAT0034370
Sequence
32- UCUGCAGACCCGGCCUUGGCAAG -55
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Proposed targets TargetScanVert: cfa-miR-2387
miRDB: MIMAT0034370