| MirGeneDB ID | Ocu-Mir-2387 |
|---|
| Family name |
MIR-2387 (all species) |
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| Seed |
GGAAGGC |
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| Species |
Rabbit (Oryctolagus cuniculus) |
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| MiRBase ID |
ocu-mir-2387
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-2387
Cfa-Mir-2387
Cpo-Mir-2387
Mmr-Mir-2387
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| Node of Origin (locus) |
Boreoeutheria
|
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| Node of Origin (family) |
Boreoeutheria
|
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Genome context
(oryCun2_add) |
chrUn0067: 358286-358340 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAGGCCGGCCAGGCCGGAGCGCGGAGGGCCUGGAAGGCCUGGCUUUGCAGCGUGGACUGAACCCUGCAGACCCGGCCUUGGCGAGCUCUCCCGCUGACGUCCCCACGGCCAAGGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAGGCCGGCCAGGCCGG---| C C G- U C C GGA
AGCG GGAGGGC UG AAGGCC GG UUUGCAG GU \
UCGC CCUCUCG GC UUCCGG CC AGACGUC CA C
AGGAACCGGCACCCCUGCAG^ - A GG C - C AGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Ocu-Mir-2387_5p |
| mirBase accession | MIMAT0048605 |
|---|
| Sequence |
0- UGGAAGGCCUGGCUUUGCAGCGU -23
Get sequence
|
|---|
| Star sequence |
Ocu-Mir-2387_3p* |
| mirBase accession | MIMAT0048606 |
|---|
| Sequence |
32- CCUGCAGACCCGGCCUUGGCGAG -55
Get sequence
|
|---|
