| MirGeneDB ID | Bta-Mir-592 |
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| Family name |
MIR-592 (all species) |
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| Seed |
UGUGUCA |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-592
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| Paralogues |
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| Orthologues |
Cfa-Mir-592
Cja-Mir-592
Cpo-Mir-592
Dno-Mir-592
Eca-Mir-592
Ete-Mir-592
Hsa-Mir-592
Laf-Mir-592
Mml-Mir-592
Mmr-Mir-592
Mmu-Mir-592
Ocu-Mir-592
Pab-Mir-592
Rno-Mir-592
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037331.1: 91320621-91320680 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAUUUAAUUUGAUGAUAUUAUGCCAUGACAUUGUGUCAAUAUGCGAUGAUGUGUGUGAUGGCACAGCGUCAUCACGUGGUGACGCAACAUCAUGACGUAAGACGUCACAACGGCCAAUUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AAUUUAAUUUGAUGAUA---| C CA A C GUGUGA
UUAUG CAUGA UUGUGUCA UAUG GAUGAUGU \
AAUGC GUACU AACGCAGU GUGC CUACUGCG U
AUUAACCGGCAACACUGCAG^ A AC G A ACACGG
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| Comment | Mir-592 was classified in Fromm et al. (2015) as a non-canonical miRNA as the Dicer cut is always +3 but given the conservation of the sequence and that it is clearly processed by Drosha it is accepted here as a bona fide miRNA. |
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-592_5p |
| mirBase accession | MIMAT0009353 |
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| Sequence |
0- UUGUGUCAAUAUGCGAUGAUGU -22
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-592
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| Star sequence |
Bta-Mir-592_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
38- UCAUCACGUGGUGACGCAACAU -60
Get sequence
|
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