MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-2218-P1

Family name MIR-2218 (all species)
Seed GGCCAGA
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-2218a
Paralogues Cel-Mir-2218-P2 
Orthologues
Node of Origin (locus) C. elegans
Node of Origin (family) C. elegans
Genome context
(ce11)		 chrI: 13812596-13812655 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2218-P1)		 Mir-2218-P1 chrI: 13812596-13812655 [+] UCSC Ensembl
Mir-2218-P2 chrI: 13834876-13834941 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUAGAAAAGCUUAGGUGAGGCUCACACUACAAACUACAAGUUUUAAGCCUCACCAAAAGUUGGGUGAGGCCAGAAUAGUGUAGUUUGUAGUGUGAGAGCCUCAACCAAAAAUGUUUUUC
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Structure
        10        20          30        40        50         
GCUAGAAAAGCUUAGGUG    --|                AGU   AA      CCAAA 
                  AGGC  UCACACUACAAACUACA   UUU  GCCUCA     A
                  UCCG  AGUGUGAUGUUUGAUGU   AAG  CGGAGU     G
CUUUUUGUAAAAACCAAC    AG^                GAU   AC      GGGUU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-2218-P1_5p*
mirBase accessionMIMAT0011455
Sequence 
0- CAAACUACAAGUUUUAAGCCUCA -23
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Proposed targets microrna.org: MIMAT0011455
TargetScanWorm: cel-miR-2218a
Mature sequence

Cel-Mir-2218-P1_3p
mirBase accessionMIMAT0011456
Sequence 
37- AGGCCAGAAUAGUGUAGUUUGUA -60
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Proposed targets microrna.org: MIMAT0011456