| MirGeneDB ID | Cja-Mir-4677 |
|---|---|
| Family name | MIR-4677 (all species) |
| Seed | CUGUAAG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-4677 Mml-Mir-4677 Mmr-Mir-4677 Pab-Mir-4677 |
| Node of Origin (locus) | Primates |
| Node of Origin (family) | Primates |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021933.1: 39082517-39082575 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAUGGAUGAUUUGGAGUAGCAAAGCAGCAAUUGUUCUUUGGUCUUUCAGCCAUGACCUGACCUUCUGUCUGUAAGACCAAAGAACUACUUUGCUUGGCCACCAUCUGCACUCAAGAGAGGet precursor sequence |
| Structure | 10 20 30 40 50 CAUGGAUGAUUUGGAGUA---| A CAAUU U C UGACCU GC AAGCAG GUUCUUUGGUCUU CAG CA \ CG UUCGUU CAAGAAACCAGAA GUC GU G GAGAGAACUCACGUCUACCAC^ G UCAU- U U CUUCCA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-4677_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UUGUUCUUUGGUCUUUCAGCCA -22
Get sequence
|
| Mature sequence | Cja-Mir-4677_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- UCUGUAAGACCAAAGAACUACU -59
Get sequence
|
