MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-4677

Family name MIR-4677 (all species)
Seed CUGUGAG
Species Human (Homo sapiens)
MiRBase ID hsa-mir-4677
Paralogues
Orthologues Cja-Mir-4677  Mml-Mir-4677  Mmr-Mir-4677  Pab-Mir-4677 
Node of Origin (locus) Primates
Node of Origin (family) Primates
Genome context
(hg38)
chr1: 243346188-243346246 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUGGAUGAUUUGGAGUAGCAAAGCAGCAAUUGUUCUUUGGUCUUUCAGCCAUGACCUGACCUUCUGUCUGUGAGACCAAAGAACUACUUUGCUUGGCCACCAUCUGCACUCAAGAGAG
Get precursor sequence
Structure
        10           20        30        40        50         
CAUGGAUGAUUUGGAGUA---| A      CAAUU             U   C  UGACCU 
                     GC AAGCAG     GUUCUUUGGUCUU CAG CA      \
                     CG UUCGUU     CAAGAAACCAGAG GUC GU      G
GAGAGAACUCACGUCUACCAC^ G      UCAU-             U   U  CUUCCA 
       110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-4677_5p*

mirBase accessionMIMAT0019760
Sequence
0- UUGUUCUUUGGUCUUUCAGCCA -22
Get sequence
Proposed targets TargetScanVert: hsa-miR-4677-5p
TargetMiner: hsa-miR-4677-5p
miRDB: MIMAT0019760
Mature sequence

Hsa-Mir-4677_3p

mirBase accessionMIMAT0019761
Sequence
37- UCUGUGAGACCAAAGAACUACU -59
Get sequence
Proposed targets TargetScanVert: hsa-miR-4677-3p
TargetMiner: hsa-miR-4677-3p
miRDB: MIMAT0019761