| MirGeneDB ID | Pab-Mir-4677 |
|---|---|
| Family name | MIR-4677 (all species) |
| Seed | CUGUGAG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-4677 Hsa-Mir-4677 Mml-Mir-4677 Mmr-Mir-4677 |
| Node of Origin (locus) | Primates |
| Node of Origin (family) | Primates |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054679.2: 5769914-5769972 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAUGGAUGAUUUGGAGUAGCAAAGCAGCAAUUGUUCUUUGGUCUUUCAGCCAUGACCUGACCUUCUGUCUGUGAGACCAAAGAACUACUUUGCUUGGCCACCAUCUGCACUCAAGAGAGGet precursor sequence |
| Structure | 10 20 30 40 50 CAUGGAUGAUUUGGAGUA---| A CAAUU U C UGACCU GC AAGCAG GUUCUUUGGUCUU CAG CA \ CG UUCGUU CAAGAAACCAGAG GUC GU G GAGAGAACUCACGUCUACCAC^ G UCAU- U U CUUCCA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Pab-Mir-4677_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UUGUUCUUUGGUCUUUCAGCCA -22
Get sequence
|
| Mature sequence | Pab-Mir-4677_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- UCUGUGAGACCAAAGAACUACU -59
Get sequence
|
