| MirGeneDB ID | Cja-Mir-511 |
|---|---|
| Family name | MIR-511 (all species) |
| Seed | AUGUGUA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cpo-Mir-511 Hsa-Mir-511 Mml-Mir-511 Mmr-Mir-511 Mmu-Mir-511 Pab-Mir-511 Rno-Mir-511 |
| Node of Origin (locus) | Euarchontoglires |
| Node of Origin (family) | Euarchontoglires |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021921.1: 16862207-16862269 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UCCAACAAUAAGAAAACGAUAGACACCCAUCAUGUCUUUUGCCCUGCAGUCGGUAAAUUUUUUUUUUUCUGAAUGUGUAGCAAAAGACAGAAUGGAGGUCGAUUGAAUCCCAAGGAUGAAGACGet precursor sequence |
| Structure | 10 20 30 40 50 60 UCCAACAAUAAGAAAACGAUA--| AC CA CC G GUAAAUUU GAC CCAU UGUCUUUUGC UGCA UCG \ CUG GGUA ACAGAAAACG GUGU AGU U CAGAAGUAGGAACCCUAAGUUAG^ GA AG AU A CUUUUUUU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Cja-Mir-511_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CAUGUCUUUUGCCCUGCAGUCG -22
Get sequence
|
| Mature sequence | Cja-Mir-511_3p (predicted) |
| mirBase accession | None |
| Sequence |
41- AAUGUGUAGCAAAAGACAGAAU -63
Get sequence
|
