MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-511

Family name MIR-511 (all species)
Seed AUGUGUA
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Cpo-Mir-511  Hsa-Mir-511  Mml-Mir-511  Mmr-Mir-511  Mmu-Mir-511  Pab-Mir-511  Rno-Mir-511 
Node of Origin (locus) Euarchontoglires
Node of Origin (family) Euarchontoglires
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021921.1: 16862207-16862269 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCCAACAAUAAGAAAACGAUAGACACCCAUCAUGUCUUUUGCCCUGCAGUCGGUAAAUUUUUUUUUUUCUGAAUGUGUAGCAAAAGACAGAAUGGAGGUCGAUUGAAUCCCAAGGAUGAAGAC
Get precursor sequence
Structure
        10        20          30        40        50        60 
UCCAACAAUAAGAAAACGAUA--|  AC    CA          CC    G   GUAAAUUU 
                       GAC  CCAU  UGUCUUUUGC  UGCA UCG        \
                       CUG  GGUA  ACAGAAAACG  GUGU AGU        U
CAGAAGUAGGAACCCUAAGUUAG^  GA    AG          AU    A   CUUUUUUU 
 120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Star sequence

Cja-Mir-511_5p* (predicted)
mirBase accessionNone
Sequence 
0- CAUGUCUUUUGCCCUGCAGUCG -22
Get sequence
Mature sequence

Cja-Mir-511_3p (predicted)
mirBase accessionNone
Sequence 
41- AAUGUGUAGCAAAAGACAGAAU -63
Get sequence