| MirGeneDB ID | Pab-Mir-511 |
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| Family name |
MIR-511 (all species) |
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| Seed |
AUGUGUA |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cja-Mir-511
Cpo-Mir-511
Hsa-Mir-511
Mml-Mir-511
Mmr-Mir-511
Mmu-Mir-511
Rno-Mir-511
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| Node of Origin (locus) |
Euarchontoglires
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| Node of Origin (family) |
Euarchontoglires
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054687.2: 17954898-17954958 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCCAACGAUAAGAAAACAAUAGACACCCAUCGUGUCUUUUGCUCUGCAGUCAGUAAAUAUUUUUUUGUGAAUGUGUAGCAAAAGACAGAAUGGUGGUCCAUUGAAUCCGCAGGAUGAAGAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UCCAACGAUAAGAAAAC--| A AC CG CU G GUAAAUA
AAU GAC CCAU UGUCUUUUGCU GCA UCA \
UUA CUG GGUA ACAGAAAACGA UGU AGU U
CAGAAGUAGGACGCCUAAG^ C GU AG UG A GUUUUUU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Pab-Mir-511_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- CGUGUCUUUUGCUCUGCAGUCA -22
Get sequence
|
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| Mature sequence |
Pab-Mir-511_3p |
| mirBase accession | None |
|---|
| Sequence |
39- AAUGUGUAGCAAAAGACAGAAU -61
Get sequence
|
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