| MirGeneDB ID | Pab-Mir-511 |
|---|---|
| Family name | MIR-511 (all species) |
| Seed | AUGUGUA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-511 Cpo-Mir-511 Hsa-Mir-511 Mml-Mir-511 Mmr-Mir-511 Mmu-Mir-511 Rno-Mir-511 |
| Node of Origin (locus) | Euarchontoglires |
| Node of Origin (family) | Euarchontoglires |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054687.2: 17954898-17954958 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UCCAACGAUAAGAAAACAAUAGACACCCAUCGUGUCUUUUGCUCUGCAGUCAGUAAAUAUUUUUUUGUGAAUGUGUAGCAAAAGACAGAAUGGUGGUCCAUUGAAUCCGCAGGAUGAAGACGet precursor sequence |
| Structure | 10 20 30 40 50 UCCAACGAUAAGAAAAC--| A AC CG CU G GUAAAUA AAU GAC CCAU UGUCUUUUGCU GCA UCA \ UUA CUG GGUA ACAGAAAACGA UGU AGU U CAGAAGUAGGACGCCUAAG^ C GU AG UG A GUUUUUU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Pab-Mir-511_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CGUGUCUUUUGCUCUGCAGUCA -22
Get sequence
|
| Mature sequence | Pab-Mir-511_3p |
| mirBase accession | None |
| Sequence |
39- AAUGUGUAGCAAAAGACAGAAU -61
Get sequence
|
