MirGeneDB 3.0

MirGeneDB ID

Cpo-Mir-511

Family name MIR-511 (all species)
Seed AUGUGUA
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-511
Paralogues
Orthologues Cja-Mir-511  Hsa-Mir-511  Mml-Mir-511  Mmr-Mir-511  Mmu-Mir-511  Pab-Mir-511  Rno-Mir-511 
Node of Origin (locus) Euarchontoglires
Node of Origin (family) Euarchontoglires
Genome context
(cavPor3)
scaffold_120: 1077095-1077155 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CCACCGACAAGGAAACAAAUAGAUACCCAUCAUGUCUUUUGCUCUGCAGUCAGUAAAUAUUUAUUUGUGAAUGUGUAGCAGAAGACAGACUGGGGAUCCAUUUAUCUCAAAGAUGAAGACG
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Structure
        10        20           30        40        50          
CCACCGACAAGGAAACAAAUA--   A    -| A           CU   G   GUAAAUA 
                       GAU CCCA UC UGUCUUUUGCU  GCA UCA       \
                       CUA GGGU AG ACAGAAGACGA  UGU AGU       U
GCAGAAGUAGAAACUCUAUUUAC   G    C^ -           UG   A   GUUUAUU 
 .       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-511_5p*

mirBase accessionMIMAT0047331
Sequence
0- CAUGUCUUUUGCUCUGCAGUCA -22
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Mature sequence

Cpo-Mir-511_3p

mirBase accessionMIMAT0047332
Sequence
39- AAUGUGUAGCAGAAGACAGACU -61
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