| MirGeneDB ID | Cja-Mir-561 |
|---|---|
| Family name | MIR-561 (all species) |
| Seed | UCAAGGA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-561 Pab-Mir-561 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021920.1: 37319502-37319558 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGAAACUUCAUCCACCAGUCCUCCAGGAACAUCAAGGAUCUUAAACUUUGCUGGAUCUACAAAGACAAAGUUUAUAAUUCUUGAAGUUCCUUGGGGAAGCGUGGAUGAUCAUUUUUAGet precursor sequence |
| Structure | 10 20 30 40 50 UGAAACUUCAUCCACCAG-- C A CU -| GGAU UCCUC AGGAAC UCAAGGAU UAAACUUUG CU C AGGGG UCCUUG AGUUCUUA AUUUGAAAC GA U AUUUUUACUAGUAGGUGCGA U A AU A^ AACA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Cja-Mir-561_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AUCAAGGAUCUUAAACUUUGCU -22
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|
| Star sequence | Cja-Mir-561_3p* (predicted) |
| mirBase accession | None |
| Sequence |
35- CAAAGUUUAUAAUUCUUGAAGU -57
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|
