MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-561

Family name MIR-561 (all species)
Seed UCAAGGA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-561
Paralogues
Orthologues Cja-Mir-561  Pab-Mir-561 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(hg38)		 chr2: 188297517-188297573 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGAAACUUCAUCCACCAGUCCUCCAGGAACAUCAAGGAUCUUAAACUUUGCCAGAGCUACAAAGGCAAAGUUUAAGAUCCUUGAAGUUCCUGGGGGAACCAUGGAUGGCUAUCCUUA
Get precursor sequence
Structure
        10          20        30        40        50        
UGAAACUUCAUCCACCAG--|           A                     AGAGC 
                    UCCUCCAGGAAC UCAAGGAUCUUAAACUUUGCC     \
                    AGGGGGUCCUUG AGUUCCUAGAAUUUGAAACGG     U
AUUCCUAUCGGUAGGUACCA^           A                     AAACA 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
CommentThis is given as Simiiformes because it appears to be lost in Macaque.
3' NTU No
MotifsNo
Tissue expression
-   +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-561_5p
mirBase accessionMIMAT0022706
Sequence 
0- AUCAAGGAUCUUAAACUUUGCC -22
Get sequence
Proposed targets TargetScanVert: hsa-miR-561-5p
TargetMiner: hsa-miR-561-5p
miRDB: MIMAT0022706
Star sequence

Hsa-Mir-561_3p*
mirBase accessionMIMAT0003225
Sequence 
35- CAAAGUUUAAGAUCCUUGAAGU -57
Get sequence
Proposed targets microrna.org: MIMAT0003225
TargetScanVert: hsa-miR-561-3p
TargetMiner: hsa-miR-561-3p
miRDB: MIMAT0003225