MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-5687

Family name MIR-5687 (all species)
Seed UGAUUCU
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-5687  Mml-Mir-5687  Pab-Mir-5687 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021916.1: 151167754-151167811 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCUAGUUGUUCUCUGCUAUCCUCACUUAUCUGAUUCUAAAAUCUUAUAAAUAGUACUCACUUUAUUUAGAAGGUUUUAGAGUCAAAUAAGUACAGAUUGGAAUCCUGAGUGCACCAC
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Structure
        10          20        30        40        50        
CUCUAGUUGUUCUCUGCU--|  CUC      C               A     AGUAC 
                    AUC   ACUUAU UGAUUCUAAAAUCUU UAAAU     U
                    UAG   UGAAUA ACUGAGAUUUUGGAA AUUUA     C
CACCACGUGAGUCCUAAGGU^  ACA      A               G     UUUCA 
      110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Cja-Mir-5687_5p (predicted)
mirBase accessionNone
Sequence 
0- CUGAUUCUAAAAUCUUAUAAAU -22
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Co-mature sequence

Cja-Mir-5687_3p (predicted)
mirBase accessionNone
Sequence 
36- UUAGAAGGUUUUAGAGUCAAAU -58
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