| MirGeneDB ID | Cja-Mir-5687 |
|---|---|
| Family name | MIR-5687 (all species) |
| Seed | UGAUUCU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-5687 Mml-Mir-5687 Pab-Mir-5687 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021916.1: 151167754-151167811 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUCUAGUUGUUCUCUGCUAUCCUCACUUAUCUGAUUCUAAAAUCUUAUAAAUAGUACUCACUUUAUUUAGAAGGUUUUAGAGUCAAAUAAGUACAGAUUGGAAUCCUGAGUGCACCACGet precursor sequence |
| Structure | 10 20 30 40 50 CUCUAGUUGUUCUCUGCU--| CUC C A AGUAC AUC ACUUAU UGAUUCUAAAAUCUU UAAAU U UAG UGAAUA ACUGAGAUUUUGGAA AUUUA C CACCACGUGAGUCCUAAGGU^ ACA A G UUUCA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Cja-Mir-5687_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- CUGAUUCUAAAAUCUUAUAAAU -22
Get sequence
|
| Co-mature sequence | Cja-Mir-5687_3p (predicted) |
| mirBase accession | None |
| Sequence |
36- UUAGAAGGUUUUAGAGUCAAAU -58
Get sequence
|
