| MirGeneDB ID | Pab-Mir-5687 |
|---|---|
| Family name | MIR-5687 (all species) |
| Seed | UGACUCU |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-5687 Hsa-Mir-5687 Mml-Mir-5687 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054683.2: 64614122-64614179 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUCUAGUUGUUCUCUGCUCUCCUCACUUAGCUGACUCUGAAAUCUUCUAAAUGGUACCCACUUUAUUUAGAACAUUUUAGGGUCAAAUAAGUACAGGUUGGAAUCCUGAGUGCACCACGet precursor sequence |
| Structure | 10 20 30 40 50 CUCUAGUUGUUCUCUGCUCU- C-| GC C GGUAC CCU ACUUA UGACUCUGAAAU UUCUAAAU C GGA UGAAU ACUGGGAUUUUA AAGAUUUA C CACCACGUGAGUCCUAAGGUU CA^ AA C UUUCA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Pab-Mir-5687_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- CUGACUCUGAAAUCUUCUAAAU -22
Get sequence
|
| Co-mature sequence | Pab-Mir-5687_3p (predicted) |
| mirBase accession | None |
| Sequence |
36- UUAGAACAUUUUAGGGUCAAAU -58
Get sequence
|
