MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-5687

Family name MIR-5687 (all species)
Seed UGACUCU
Species Human (Homo sapiens)
MiRBase ID hsa-mir-5687
Paralogues
Orthologues Cja-Mir-5687  Mml-Mir-5687  Pab-Mir-5687 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(hg38)
chr5: 55508859-55508916 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCUAGUUGUUCUCUGCUCUCCUCACUUAUCUGACUCUGAAAUCUUCUAAAUGGUACCCACUUUAUUUAGAACGUUUUAGGGUCAAAUAAGUACAGGUUGGAAUCCUGAGUGCACCAC
Get precursor sequence
Structure
        10        20          30        40        50        
CUCUAGUUGUUCUCUGCUCU-   C-|     C            C        GGUAC 
                     CCU  ACUUAU UGACUCUGAAAU UUCUAAAU     C
                     GGA  UGAAUA ACUGGGAUUUUG AAGAUUUA     C
CACCACGUGAGUCCUAAGGUU   CA^     A            C        UUUCA 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-5687_5p

mirBase accessionNone
Sequence
0- CUGACUCUGAAAUCUUCUAAAU -22
Get sequence
Co-mature sequence

Hsa-Mir-5687_3p

mirBase accessionMIMAT0022478
Sequence
36- UUAGAACGUUUUAGGGUCAAAU -58
Get sequence
Proposed targets TargetScanVert: hsa-miR-5687
TargetMiner: hsa-miR-5687
miRDB: MIMAT0022478