| MirGeneDB ID | Cja-Mir-887 |
|---|---|
| Family name | MIR-887 (all species) |
| Seed | UGAACGG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-887 Mml-Mir-887 Pab-Mir-887 |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Simiiformes |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021916.1: 186031565-186031629 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGACAUCAUCAGAGAGCCCUGGGGUGCAGAACCUUGGGAGCCCUGUUAGACUCUGGAUUUUAAACUUGGAGUGAACGGGCGCCAUCCCGAGGCUUUGCAUAGGGGCAUGCUUCGAAUUCCAUUUUGet precursor sequence |
| Structure | 10 20 30 40 50 60 UGACAUCAUCAGAGAGC--- GGG A -- -| AG UGGAUUU CCU GUGCAGA CCUUGGGA GC CCUGUU ACUC \ GGG UACGUUU GGAGCCCU CG GGGCAA UGAG U UUUUACCUUAAGCUUCGUAC GA- C AC C^ G- GUUCAAA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Cja-Mir-887_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- ACCUUGGGAGCCCUGUUAGACUC -23
Get sequence
|
| Mature sequence | Cja-Mir-887_3p (predicted) |
| mirBase accession | None |
| Sequence |
40- GUGAACGGGCGCCAUCCCGAGGCUU -65
Get sequence
|
