MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-887

Family name MIR-887 (all species)
Seed UGAACGG
Species Human (Homo sapiens)
MiRBase ID hsa-mir-887
Paralogues
Orthologues Cja-Mir-887  Mml-Mir-887  Pab-Mir-887 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(hg38)
chr5: 15935189-15935253 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGAUGCCGUCAGAGAGCCCCGGGGUGCAGAUCCUUGGGAGCCCUGUUAGACUCUGGAUUUUACACUUGGAGUGAACGGGCGCCAUCCCGAGGCUUUGCACAGGGGCAAGCUUCGAGUUCCGUUUU
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Structure
        10           20        30          40         50        60 
AGAUGCCGUCAGAGAGC---   GGG       U        --  -|     AG    UGGAUUU 
                    CCC   GUGCAGA CCUUGGGA  GC CCUGUU  ACUC       \
                    GGG   CACGUUU GGAGCCCU  CG GGGCAA  UGAG       U
UUUUGCCUUGAGCUUCGAAC   GA-       C        AC  C^     G-    GUUCACA 
   120       110        100        90        80         70
Deep sequencing
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CommentThere is a second Drosha cut +1 on both arms.
3' NTU No
MotifsNo
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-887_5p*

mirBase accessionMIMAT0026720
Sequence
0- UCCUUGGGAGCCCUGUUAGACUC -23
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Proposed targets TargetScanVert: hsa-miR-887-5p
miRDB: MIMAT0026720
Mature sequence

Hsa-Mir-887_3p

mirBase accessionMIMAT0004951
Sequence
40- GUGAACGGGCGCCAUCCCGAGGCUU -65
Get sequence
Proposed targets microrna.org: MIMAT0004951
TargetScanVert: hsa-miR-887-3p
miRDB: MIMAT0004951