MirGeneDB 2.1
MirGeneDB ID

Cli-Mir-2131

Family name MIR-2131 (all species)
Seed UGCAGAA
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-2131
Paralogues
Orthologues Gga-Mir-2131  Tgu-Mir-2131 
Node of Origin (locus) Neognathae
Node of Origin (family) Neognathae
Genome context
(colLiv2)		 scaffold476: 26740-26804 [-]
Clustered miRNAs
(< 50kb from Mir-2131)		 Mir-2954 scaffold476: 14816-14876 [+]
Mir-2131 scaffold476: 26740-26804 [-]
Precursor
(pre-Mir +30nt flank)
GUUCUGUUAAAGAGUGCUCUUGUGGCUUCCAUGCAGAAGUGCACGGAAACAGCUAUUUGCUAUUGAAAAGUUGGCUGUUACUGUUCUUCUGAUGGAUGCUGCUGGAUUCUGACACUGGCAUGUGC
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Structure
        10          20        30        40        50        60   
GUUCUGUUAAAGAGUGC--|  U UG  U     G      UGC    A       AUUUGCUA 
                   UCU G  GC UCCAU CAGAAG   ACGG AACAGCU        U
                   AGG C  CG AGGUA GUCUUC   UGUC UUGUCGG        U
CGUGUACGGUCACAGUCUU^  U GU  U     -      U--    A       UUGAAAAG 
   120       110       100         90          80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Cl Cl Cl Cl Cl To
Mature sequence

Cli-Mir-2131_5p
mirBase accessionMIMAT0038707
Sequence 
0- AUGCAGAAGUGCACGGAAACAGCU -24
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Co-mature sequence

Cli-Mir-2131_3p
mirBase accessionMIMAT0038708
Sequence 
44- CUGUUACUGUUCUUCUGAUGG -65
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