| MirGeneDB ID | Cpo-Mir-95 |
|---|
| Family name |
MIR-95 (all species) |
|---|
| Seed |
UCAAUGG |
|---|
| Species |
Guinea pig (Cavia porcellus) |
|---|
| MiRBase ID |
cpo-mir-95
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-95
Cfa-Mir-95
Cja-Mir-95
Dno-Mir-95
Eca-Mir-95
Hsa-Mir-95
Laf-Mir-95
Mml-Mir-95
Mmr-Mir-95
Pab-Mir-95
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(cavPor3) |
scaffold_166: 785836-785892 [-]
UCSC
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGGGGACUGUGAUGCUUAGCACAGUGGGCGCUCAAUAAAUGUUGGUUGAAUUAAGCUGCGUUAAAUUCAAUGGGUAUUUACUGAGCCCUCACUCUGUGCCAGACACUGAGAGGGAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGGGGACUGUGAUGCUUA --| C A G AAGCU
GCAC AGUGGG GCUCA UAAAUGUU GUUGAAUU \
CGUG UCACUC CGAGU AUUUAUGG UAACUUAA G
CUAGGGAGAGUCACAGAC UC^ C C G AUUGC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
To |
| |
|
|
|---|
| Star sequence |
Cpo-Mir-95_5p* (predicted) |
| mirBase accession | MIMAT0046935 |
|---|
| Sequence |
0- CUCAAUAAAUGUUGGUUGAAUU -22
Get sequence
|
|---|
| Mature sequence |
Cpo-Mir-95_3p (predicted) |
| mirBase accession | MIMAT0046936 |
|---|
| Sequence |
35- UUCAAUGGGUAUUUACUGAGCC -57
Get sequence
|
|---|
