MirGeneDB ID | Cpo-Mir-95 |
Family name |
MIR-95 (all species) |
Seed |
UCAAUGG |
Species |
Guinea pig (Cavia porcellus) |
MiRBase ID |
cpo-mir-95
|
Paralogues |
|
Orthologues |
Bta-Mir-95
Cfa-Mir-95
Cja-Mir-95
Dno-Mir-95
Eca-Mir-95
Hsa-Mir-95
Laf-Mir-95
Mml-Mir-95
Mmr-Mir-95
Pab-Mir-95
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (cavPor3) |
scaffold_166: 785836-785892 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
GGGGGACUGUGAUGCUUAGCACAGUGGGCGCUCAAUAAAUGUUGGUUGAAUUAAGCUGCGUUAAAUUCAAUGGGUAUUUACUGAGCCCUCACUCUGUGCCAGACACUGAGAGGGAUC
Get precursor sequence
|
Structure | 10 20 30 40 50
GGGGGACUGUGAUGCUUA --| C A G AAGCU
GCAC AGUGGG GCUCA UAAAUGUU GUUGAAUU \
CGUG UCACUC CGAGU AUUUAUGG UAACUUAA G
CUAGGGAGAGUCACAGAC UC^ C C G AUUGC
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
Bl |
Bl |
Bl |
Bl |
Oo |
Oo |
Oo |
Oo |
To |
Wh |
|
|
|
Star sequence |
Cpo-Mir-95_5p* (predicted) |
mirBase accession | MIMAT0046935 |
Sequence |
0- CUCAAUAAAUGUUGGUUGAAUU -22
Get sequence
|
Mature sequence |
Cpo-Mir-95_3p (predicted) |
mirBase accession | MIMAT0046936 |
Sequence |
35- UUCAAUGGGUAUUUACUGAGCC -57
Get sequence
|