MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-95

Family name MIR-95 (all species)
Seed UCAACGG
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-95  Cfa-Mir-95  Cja-Mir-95  Cpo-Mir-95  Dno-Mir-95  Eca-Mir-95  Hsa-Mir-95  Laf-Mir-95  Mml-Mir-95  Mmr-Mir-95 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054682.2: 4874902-4874958 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUAGGAUUGUGACACCCAACACAGUGGGCACUCAAUAAAUGUCUGUUGAAUUGAAAUGCGUUACAUUCAACGGGUAUUUAUUGAGCACCCACUCUGUGCCAGACGCUGAGCGGGGCG
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Structure
        10          20        30        40        50        
GUAGGAUUGUGACACCCA--|  C      CA          GU         UGAAAU 
                    ACA AGUGGG  CUCAAUAAAU  CUGUUGAAU      \
                    UGU UCACCC  GAGUUAUUUA  GGCAACUUA      G
GCGGGGCGAGUCGCAGACCG^  C      AC          UG         CAUUGC 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Br Li Li
Star sequence

Pab-Mir-95_5p*

mirBase accessionNone
Sequence
0- CUCAAUAAAUGUCUGUUGAAUU -22
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Mature sequence

Pab-Mir-95_3p

mirBase accessionNone
Sequence
35- UUCAACGGGUAUUUAUUGAGCA -57
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