MirGeneDB ID | Pab-Mir-95 |
Family name |
MIR-95 (all species) |
Seed |
UCAACGG |
Species |
Sumatran orangutan (Pongo abelii) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-95
Cfa-Mir-95
Cja-Mir-95
Cpo-Mir-95
Dno-Mir-95
Eca-Mir-95
Hsa-Mir-95
Laf-Mir-95
Mml-Mir-95
Mmr-Mir-95
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054682.2: 4874902-4874958 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GUAGGAUUGUGACACCCAACACAGUGGGCACUCAAUAAAUGUCUGUUGAAUUGAAAUGCGUUACAUUCAACGGGUAUUUAUUGAGCACCCACUCUGUGCCAGACGCUGAGCGGGGCG
Get precursor sequence
|
Structure | 10 20 30 40 50
GUAGGAUUGUGACACCCA--| C CA GU UGAAAU
ACA AGUGGG CUCAAUAAAU CUGUUGAAU \
UGU UCACCC GAGUUAUUUA GGCAACUUA G
GCGGGGCGAGUCGCAGACCG^ C AC UG CAUUGC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Pab-Mir-95_5p* |
mirBase accession | None |
Sequence |
0- CUCAAUAAAUGUCUGUUGAAUU -22
Get sequence
|
Mature sequence |
Pab-Mir-95_3p |
mirBase accession | None |
Sequence |
35- UUCAACGGGUAUUUAUUGAGCA -57
Get sequence
|