MirGeneDB ID | Pab-Mir-95 |
---|---|
Family name | MIR-95 (all species) |
Seed | UCAACGG |
Species | Sumatran orangutan (Pongo abelii) |
MiRBase ID | |
Paralogues | |
Orthologues | Bta-Mir-95 Cfa-Mir-95 Cja-Mir-95 Cpo-Mir-95 Dno-Mir-95 Eca-Mir-95 Hsa-Mir-95 Laf-Mir-95 Mml-Mir-95 Mmr-Mir-95 |
Node of Origin (locus) | Eutheria |
Node of Origin (family) | Eutheria |
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054682.2: 4874902-4874958 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | GUAGGAUUGUGACACCCAACACAGUGGGCACUCAAUAAAUGUCUGUUGAAUUGAAAUGCGUUACAUUCAACGGGUAUUUAUUGAGCACCCACUCUGUGCCAGACGCUGAGCGGGGCGGet precursor sequence |
Structure | 10 20 30 40 50 GUAGGAUUGUGACACCCA--| C CA GU UGAAAU ACA AGUGGG CUCAAUAAAU CUGUUGAAU \ UGU UCACCC GAGUUAUUUA GGCAACUUA G GCGGGGCGAGUCGCAGACCG^ C AC UG CAUUGC 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Star sequence | Pab-Mir-95_5p* |
mirBase accession | None |
Sequence |
0- CUCAAUAAAUGUCUGUUGAAUU -22
Get sequence
|
Mature sequence | Pab-Mir-95_3p |
mirBase accession | None |
Sequence |
35- UUCAACGGGUAUUUAUUGAGCA -57
Get sequence
|