| MirGeneDB ID | Csc-Mir-5735 |
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| Family name |
MIR-5735 (all species) |
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| Seed |
GGACAAC |
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| Species |
Arizona bark scorpion (Centruroides sculpturatus) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Lpo-Mir-5735-P1
Lpo-Mir-5735-P2
Tur-Mir-5735
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| Node of Origin (locus) |
Chelicerata
|
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| Node of Origin (family) |
Chelicerata
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Genome context
(GCF_000671375.1_CSC) |
NW_019385159.1: 88354-88412 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UAUAUAAACUUCACGAAAAUGGUCUGCAGCACCUUUCUCAUGUUGUCUACUGUGUCUAUCGAAAUCAGUGGACAACAAGAUAAAGGCGUUGUAGUUCAUUACUUUUCAGUCGUUGUAAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UAUAUAAACUUCACGAA--| GU A C A GUGUCUA
AAUG CUGCAGC CCUUU UC UGUUGUCUACU \
UUAC GAUGUUG GGAAA AG ACAACAGGUGA U
GAAUGUUGCUGACUUUUCA^ UU C U A CUAAAGC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Dicer cut +1 on the 5p arm. |
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| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Csc-Mir-5735_5p* |
| mirBase accession | None |
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| Sequence |
0- ACCUUUCUCAUGUUGUCUACU -21
Get sequence
|
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| Mature sequence |
Csc-Mir-5735_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UGGACAACAAGAUAAAGGCGU -59
Get sequence
|
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