| MirGeneDB ID | Tur-Mir-5735 |
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| Family name |
MIR-5735 (all species) |
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| Seed |
GGACAAC |
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| Species |
Two-spotted spider mite (Tetranychus urticae) |
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| MiRBase ID |
tur-mir-5735
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| Paralogues |
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| Orthologues |
Csc-Mir-5735
Lpo-Mir-5735-P1
Lpo-Mir-5735-P2
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| Node of Origin (locus) |
Chelicerata
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| Node of Origin (family) |
Chelicerata
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Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces) |
HE587314.1: 1981826-1981884 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGAUUUUUUGCUGUUGAUUGUGAAUUGUUCACCUUUCUCUUGUUGUCCACUGCUCAUGCAAGCAACAGUGGACAACAGGAUAAUGGCGUUCAAUAAGCAAACCACUCGGCCUGUAACUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UGAUUUUUUGCUGUUGA--| GA UUCA U C GCUCAUG
UUGU AUUG CC UU UCUUGUUGUCCACU \
AACG UAAC GG AA AGGACAACAGGUGA C
UUCAAUGUCCGGCUCACCA^ AA UUGC U U CAACGAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Tur-Mir-5735_5p* |
| mirBase accession | MIMAT0023092 |
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| Sequence |
0- ACCUUUCUCUUGUUGUCCACU -21
Get sequence
|
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| Mature sequence |
Tur-Mir-5735_3p |
| mirBase accession | MIMAT0023093 |
|---|
| Sequence |
38- UGGACAACAGGAUAAUGGCGU -59
Get sequence
|
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