| MirGeneDB ID | Dan-Mir-955 |
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| Family name |
MIR-955 (all species) |
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| Seed |
AUCGUGC |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Dme-Mir-955
Dmo-Mir-955
Dsi-Mir-955
Dya-Mir-955
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| Node of Origin (locus) |
Drosophila
|
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| Node of Origin (family) |
Drosophila
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Genome context
(Dana_caf1) |
scaffold_13337: 7606454-7606515 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAGGAUGUUUUUUGAGAAGCUCAUCAGCUCCAUCGUGCAGAGGUUUGAGUGUCUAAUUUUUAACCAUUCGCAUUCAACCUUUGGACGGUAGAGAUGGUCAGUGAGAAAGCAACCUAUACAGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AAGGAUGUUUUUUGAGAA--| C G C G U CUAAUUUU
GCU AUCA CUC AUCGU CAGAGGUU GAGUGU \
UGA UGGU GAG UGGCA GUUUCCAA CUUACG U
AGACAUAUCCAACGAAAGAG^ C A A G - CUUACCAA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dan-Mir-955_5p |
| mirBase accession | None |
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| Sequence |
0- CAUCGUGCAGAGGUUUGAGUGUC -23
Get sequence
|
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| Star sequence |
Dan-Mir-955_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- CAUUCAACCUUUGGACGGUAGA -62
Get sequence
|
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