MirGeneDB 3.0

MirGeneDB ID

Dya-Mir-955

Family name MIR-955 (all species)
Seed AUCGUGC
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues
Orthologues Dan-Mir-955  Dme-Mir-955  Dmo-Mir-955  Dsi-Mir-955 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
3L: 3844770-3844832 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAUAAGUAAAGUAAACAGCUAAUCAACUCCAUCGUGCAGAAGUUUGAGUGUCCUGUGUGUUGCCUAAUCGCAUUCAAUUUCUGAACGGUAGAGAUGGUACGCUUAGAAACAACCUAAAAUGA
Get precursor sequence
Structure
        10          20        30        40        50        60 
AAAUAAGUAAAGUAAAC--|  UA    A   C     G        U      CCUGUGUG 
                   AGC  AUCA CUC AUCGU CAGAAGUU GAGUGU        U
                   UCG  UGGU GAG UGGCA GUCUUUAA CUUACG        U
AGUAAAAUCCAACAAAGAU^  CA    A   A     A        -      CUAAUCCG 
 120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Wh
Mature sequence

Dya-Mir-955_5p

mirBase accessionNone
Sequence
0- CAUCGUGCAGAAGUUUGAGUGUC -23
Get sequence
Star sequence

Dya-Mir-955_3p*

mirBase accessionNone
Sequence
41- CAUUCAAUUUCUGAACGGUAGA -63
Get sequence