| MirGeneDB ID | Dan-Mir-975 |
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| Family name |
MIR-975 (all species) |
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| Seed |
CGGAUGU |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Dme-Mir-975
Dmo-Mir-975
Dsi-Mir-975
Dya-Mir-975
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| Node of Origin (locus) |
Drosophila
|
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| Node of Origin (family) |
Drosophila
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Genome context
(Dana_caf1) |
scaffold_13417: 2467720-2467781 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CCAAGCCAGUCGACAAUGAAUAUUUGAUUUUAAACACUACCUACAUCCAGUAUGUUACUUGACUCCCAAUACGGAUGUGGAGGGCGUUUACACUCAGAGAUUCUGGAGCCACUGCCGUCCAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CCAAGCCAGUCGACAAU--| A UUU A AC A GUUACUU
GAAU UUUGA UAAAC CU CUACAUCC GUAU \
CUUA AGACU AUUUG GG GGUGUAGG CAUA G
GACCUGCCGUCACCGAGGU^ G CAC C GA - ACCCUCA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Dan-Mir-975_5p* |
| mirBase accession | None |
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| Sequence |
0- UAAACACUACCUACAUCCAGUAU -23
Get sequence
|
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| Mature sequence |
Dan-Mir-975_3p |
| mirBase accession | None |
|---|
| Sequence |
40- ACGGAUGUGGAGGGCGUUUACA -62
Get sequence
|
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