MirGeneDB 3.0

MirGeneDB ID

Dmo-Mir-975

Family name MIR-975 (all species)
Seed CAAGAUG
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues Dan-Mir-975  Dme-Mir-975  Dsi-Mir-975  Dya-Mir-975 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Dmoj_caf1)
scaffold_6328: 2901150-2901214 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAUGCCAGCAUUUCAUAUGGUCUUUGAUUGUAGAUACUCCCUAUAUCCCGUAUGUGCGAUACUUUGAUAAAAUACAAGAUGUAUGGGGUGUCUGCAAUCACAAACCACAUAGCCGCAAUCAAACA
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Structure
        10         20        30        40        50        60  
AAUGCCAGCAUUUCAUA-|   CUU                C      CC    GUGCGAUA 
                  UGGU   UGAUUGUAGAUACUCC UAUAUC  GUAU        C
                  ACCA   ACUAACGUCUGUGGGG AUGUAG  CAUA        U
ACAAACUAACGCCGAUAC^   AAC                U      AA    AAAUAGUU 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Em Fe Ma Ma
Star sequence

Dmo-Mir-975_5p*

mirBase accessionNone
Sequence
0- UAGAUACUCCCUAUAUCCCGUAU -23
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Mature sequence

Dmo-Mir-975_3p

mirBase accessionNone
Sequence
43- ACAAGAUGUAUGGGGUGUCUGC -65
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