MirGeneDB 3.0

MirGeneDB ID

Dan-Novel-15

Family name DAN-NOVEL-15 (all species)
Seed AGUACAC
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. ananassae
Node of Origin (family) D. ananassae
Genome context
(Dana_caf1)
scaffold_13266: 4131702-4131759 [+] Ensembl
Clustered miRNAs
(< 50kb from Novel-15)
Mir-7 scaffold_13266: 4109379-4109440 [-] Ensembl
Mir-92-P7 scaffold_13266: 4132688-4132749 [+] Ensembl
Mir-92-P6 scaffold_13266: 4132944-4133001 [+] Ensembl
Mir-92-P5 scaffold_13266: 4133064-4133125 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAGAAAAAAAAAGUUGUUCAUAAUUUCUUAGAACCGGCAUCGUGUAUCUUGUCUUAUUCUCGCACAAGUACACGGUUCCGACUCUAUGUAUUUUGAAACAAUUCUUCUGAAUUAAGU
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Structure
        10           20        30        40        50         
AAAGAAAAAAAAAGUUG---|   U   UUCU    AC   C        U     CUUAU 
                    UUCA AAU    UAGA  CGG AUCGUGUA CUUGU     \
                    AAGU UUA    AUCU  GCC UGGCACAU GAACA     U
UGAAUUAAGUCUUCUUAACA^   U   UGU-    CA   U        -     CGCUC 
      110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe
Star sequence

Dan-Novel-15_5p*

mirBase accessionNone
Sequence
0- AGAACCGGCAUCGUGUAUCUUGU -23
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Mature sequence

Dan-Novel-15_3p

mirBase accessionNone
Sequence
36- AAGUACACGGUUCCGACUCUAU -58
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