MirGeneDB ID | Dgr-Let-7-P23 |
---|---|
Family name | LET-7 (all species) |
Seed | GAGGUAG |
Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
MiRBase ID | |
Paralogues | Dgr-Let-7-P24 Dgr-Let-7-P25 |
Orthologues | Aae-Let-7 Aga-Let-7 Agr-Let-7 Ava-Let-7-P23 Bge-Let-7 Bko-Let-7 Bpl-Let-7 Cte-Let-7 Dan-Let-7 Dlo-Let-7 Dma-Let-7 Dme-Let-7 Dmo-Let-7 Dpu-Let-7 Dsi-Let-7 Dya-Let-7 Eba-Let-7 Egr-Let-7 Esc-Let-7 Gpa-Let-7 Gsa-Let-7 Gsp-Let-7 Hme-Let-7 Hmi-Let-7 Hru-Let-7 Isc-Let-7 Lan-Let-7 Lgi-Let-7 Lhy-Let-7 Llo-Let-7 Mgi-Let-7 Mom-Let-7 Npo-Let-7 Obi-Let-7 Ofu-Let-7 Ovu-Let-7 Pau-Let-7 Pca-Let-7 Pcr-Let-7 Pdu-Let-7 Pfl-Let-7 Ple-Let-7 Pmi-Let-7 Pve-Let-7 Rph-Let-7 Sko-Let-7 Sma-Let-7 Sne-Let-7 Snu-Let-7 Spu-Let-7 Sro-Let-7 Tca-Let-7 Tur-Let-7 War-Let-7 Xbo-Let-7 |
Node of Origin (locus) | D. gyrociliatus |
Node of Origin (family) | Bilateria |
Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000002.1: 1227299-1227368 [+] |
Precursor (pre-Mir +30nt flank) | AUUGUACACAUGAAAACGCGCCUGUUAUGUCGAGGUAGUGGGUUGUAUAGUUGACAGAAACAUCAAGCAUAAGGAGAACCGUACAACCUACUGGCUUUACUUAACUGAGCGUUCCCUCUUCGGUAUUCAUGet precursor sequence |
Structure | 10 20 30 40 50 60 AUUGUACACAUGAAAAC- CU-| U C G UA GACAGAAACAU GCGC GUUA GU GAG UAGUGGGUUGUA GUU C UGCG CAAU CA UUC GUCAUCCAACAU CAA A UACUUAUGGCUUCUCCCU AGU^ U U G GC GAGGAAUACGA . 120 110 100 90 80 70 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | CNNC at 3p(+17) |
Mature sequence | Dgr-Let-7-P23_5p (predicted) |
mirBase accession | None |
Sequence |
0- CGAGGUAGUGGGUUGUAUAGUU -22
Get sequence
|
Star sequence | Dgr-Let-7-P23_3p* (predicted) |
mirBase accession | None |
Sequence |
48- CCGUACAACCUACUGGCUUUAC -70
Get sequence
|