MirGeneDB 3.0

MirGeneDB ID

Dre-Mir-734

Family name MIR-734 (all species)
Seed AAAUGCU
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-734
Paralogues
Orthologues Gmo-Mir-734  Loc-Mir-734  Mal-Mir-734 
Node of Origin (locus) Neopterygii
Node of Origin (family) Neopterygii
Genome context
(danRer11)
chr1: 34122894-34122960 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGCUUUGCAUCCUUUGAUAUUGAGAGCUGAACCAUUCUGCAGCAUGGCUGCCUGUGGAUCCUCUGGGGAAAGGUAAAUGCUGCAGAAUCGUACCGUUCUUGGUAUCACUGGUCUUCACUUCACUG
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Structure
        10          20        30        40         50        60  
CCUGCUUUGCAUCCUUU--     UG     UGA  C            G-|  GCCUGUGGAU 
                   GAUAU  AGAGC   AC AUUCUGCAGCAU  GCU          C
                   CUAUG  UCUUG   UG UAAGACGUCGUA  UGG          C
GUCACUUCACUUCUGGUCA     GU     CCA  C            AA^  AAAGGGGUCU 
     120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-734_5p*

mirBase accessionNone
Sequence
0- GAACCAUUCUGCAGCAUGGCUG -22
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Mature sequence

Dre-Mir-734_3p

mirBase accessionMIMAT0003765
Sequence
45- UAAAUGCUGCAGAAUCGUACCG -67
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Proposed targets TargetScanFish: dre-miR-734