| MirGeneDB ID | Dsi-Mir-1003 |
|---|
| Family name |
MIR-1003 (all species) |
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| Seed |
CUCACAU |
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| Species |
Fruit fly (Drosophila simulans) |
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| MiRBase ID |
dsi-mir-1003
|
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| Paralogues |
|
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| Orthologues |
Dan-Mir-1003
Dme-Mir-1003
Dmo-Mir-1003
Dya-Mir-1003
|
|---|
| Node of Origin (locus) |
Drosophila
|
|---|
| Node of Origin (family) |
Drosophila
|
|---|
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel) |
JPYS01000009: 4279-4334 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GCGCGAACUGGCACUGAAGCUGCGCAGAAGGUGGGUAUCUGGAUGUGGUUGGCUCUGGCGGUCCUCUCACAUUUACAUAUUCACAGGCGCCGUGAGCUGCGUCACAAAUAUGGAAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCGCGAACUGGCACUGA- ----| AGAAG C UU CUCU
AGCU GCGC GUGGGUAU UGGAUGUGG GG G
UCGA CGCG CACUUAUA AUUUACACU CC G
CAAGGUAUAAACACUGCG GUGC^ GA--- C CU UGGC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Dsi-Mir-1003_5p* |
| mirBase accession | MIMAT0012427 |
|---|
| Sequence |
0- GUGGGUAUCUGGAUGUGGUUGG -22
Get sequence
|
|---|
| Mature sequence |
Dsi-Mir-1003_3p |
| mirBase accession | MIMAT0012428 |
|---|
| Sequence |
34- UCUCACAUUUACAUAUUCACAG -56
Get sequence
|
|---|
