MirGeneDB ID | Dsi-Mir-14 |
Family name |
MIR-14 (all species) |
Seed |
CAGUCUU |
Species |
Fruit fly (Drosophila simulans) |
MiRBase ID |
dsi-mir-14
|
Paralogues |
|
Orthologues |
Aae-Mir-14
Aga-Mir-14
Bge-Mir-14
Dan-Mir-14
Dlo-Mir-14
Dme-Mir-14
Dmo-Mir-14
Dya-Mir-14
Gpa-Mir-14
Hme-Mir-14
Tca-Mir-14
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Drosophila_simulans.ASM75419v3.dna.toplevel) |
2R: 6226266-6226324 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AACAACAACGUAACGUACUGCAACCUAUGUGGGAGCGAGACGGGGACUCACUGUGCUUAUUAAAUAGUCAGUCUUUUUCUCUCUCCUAUACAAAUUGCGGGCGUAUCAUCAUGGCACAA
Get precursor sequence
|
Structure | 10 20 30 40 50
AACAACAACGUAACGUA--| CCUA C CG C GUGCUU
CUGCAA UGUGGGAG GAGA GGGACU ACU \
GGCGUU AUAUCCUC CUCU UUCUGA UGA A
AACACGGUACUACUAUGCG^ AAAC U UU C UAAAUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Star sequence |
Dsi-Mir-14_5p* |
mirBase accession | None |
Sequence |
0- GGGAGCGAGACGGGGACUCACU -22
Get sequence
|
Mature sequence |
Dsi-Mir-14_3p |
mirBase accession | MIMAT0008848 |
Sequence |
37- UCAGUCUUUUUCUCUCUCCUAU -59
Get sequence
|