| MirGeneDB ID | Gpa-Mir-14 |
|---|
| Family name |
MIR-14 (all species) |
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| Seed |
CAGUCUU |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Mir-14
Aga-Mir-14
Bge-Mir-14
Dan-Mir-14
Dlo-Mir-14
Dme-Mir-14
Dmo-Mir-14
Dsi-Mir-14
Dya-Mir-14
Hme-Mir-14
Tca-Mir-14
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| Node of Origin (locus) |
Neoptera
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| Node of Origin (family) |
Neoptera
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Genome context
(GpalI1) |
Scaffold360: 74590-74661 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUUUCUGAAACAACGCACUGCAACAUAUGUGGGAGCGAGAUAGGGACUUGCUGUGAUUUUAUUAUCGUCAAUUCGACAAGUCAGUCUUUUUCUCUCUCCUAUAAAAAAUUGCGGGCGUAUCAUCCUAAGUAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GUUUCUGAAACAACGCA- CAUA-| C U U GUGAUUUUAUUA
CUGCAA UGUGGGAG GAGA AGGGACU GCU U
GGCGUU AUAUCCUC CUCU UUUCUGA UGA C
AAUGAAUCCUACUAUGCG AAAAA^ U U C ACAGCUUAACUG
130 120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Drosha cut -1 on both arms. |
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| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
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| Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
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| Star sequence |
Gpa-Mir-14_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GGGAGCGAGAUAGGGACUUGCU -22
Get sequence
|
|---|
| Mature sequence |
Gpa-Mir-14_3p |
| mirBase accession | None |
|---|
| Sequence |
50- UCAGUCUUUUUCUCUCUCCUAU -72
Get sequence
|
|---|
