MirGeneDB 3.0

MirGeneDB ID

Gpa-Mir-14

Family name MIR-14 (all species)
Seed CAGUCUU
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues
Orthologues Aae-Mir-14  Aga-Mir-14  Bge-Mir-14  Dan-Mir-14  Dlo-Mir-14  Dme-Mir-14  Dmo-Mir-14  Dsi-Mir-14  Dya-Mir-14  Hme-Mir-14  Tca-Mir-14 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(GpalI1)
Scaffold360: 74590-74661 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUUUCUGAAACAACGCACUGCAACAUAUGUGGGAGCGAGAUAGGGACUUGCUGUGAUUUUAUUAUCGUCAAUUCGACAAGUCAGUCUUUUUCUCUCUCCUAUAAAAAAUUGCGGGCGUAUCAUCCUAAGUAA
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Structure
        10         20         30        40        50        60     
GUUUCUGAAACAACGCA-      CAUA-|       C    U       U   GUGAUUUUAUUA 
                  CUGCAA     UGUGGGAG GAGA AGGGACU GCU            U
                  GGCGUU     AUAUCCUC CUCU UUUCUGA UGA            C
AAUGAAUCCUACUAUGCG      AAAAA^       U    U       C   ACAGCUUAACUG 
130       120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Drosha cut -1 on both arms.
3' NTU No
MotifsUGUG in loop
Tissue expression
 +
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Star sequence

Gpa-Mir-14_5p*

mirBase accessionNone
Sequence
0- GGGAGCGAGAUAGGGACUUGCU -22
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Mature sequence

Gpa-Mir-14_3p

mirBase accessionNone
Sequence
50- UCAGUCUUUUUCUCUCUCCUAU -72
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