MirGeneDB ID | Dsi-Mir-985 |
Family name |
MIR-985 (all species) |
Seed |
AAAUGUU |
Species |
Fruit fly (Drosophila simulans) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Dme-Mir-985
|
Node of Origin (locus) |
D. melanogaster + D. simulans
|
Node of Origin (family) |
D. melanogaster + D. simulans
|
Genome context (Drosophila_simulans.ASM75419v3.dna.toplevel) |
X: 15200450-15200504 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UCAAAUCUUGCUUUGAUAAUUACAGCACUGCUGGCUCAUUUGUACAUUUCAUAAGUACCUUAUGAAAUGUUCCAAUGGUCGGGCAAAGCUAUUACUGGUCCAUGUUUUGGAUAGA
Get precursor sequence
|
Structure | 10 20 30 40 50
UCAAAUCUUGCUUUGAUAAUUAC-- AC -| U UGU AAGU
AGC UG CUGGC CAUU ACAUUUCAU \
UCG AC GGCUG GUAA UGUAAAGUA A
AGAUAGGUUUUGUACCUGGUCAUUA AA G^ - CCU UUCC
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dsi-Mir-985_5p* |
mirBase accession | None |
Sequence |
0- CUGGCUCAUUUGUACAUUUCAU -22
Get sequence
|
Mature sequence |
Dsi-Mir-985_3p |
mirBase accession | None |
Sequence |
33- GAAAUGUUCCAAUGGUCGGGCA -55
Get sequence
|