| MirGeneDB ID | Ebu-Mir-205-P6 |
|---|
| Family name |
MIR-205 (all species) |
|---|
| Seed |
CCUUCAU |
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| Species |
Inshore hagfish (Eptatretus burgeri) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Ebu-Mir-205-P5
|
|---|
| Orthologues |
|
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| Node of Origin (locus) |
E. burgeri
|
|---|
| Node of Origin (family) |
Vertebrata
|
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Genome context
(Eburgeri_3) |
FYBX02009826.1: 1134510-1134566 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CUGACUCUGAUUUCACCUGGCUCCUUCGGGUCCUUCAUUCCACCGGUGUCUGUUUAAUGGCUGCAGACGUCCGUGGCAUGGAGGCCUCGAGGGGGCUGCAUAGCAUGGAGGCCUUUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUGACUCUGAUUUCACCU--| U U C - GUUUAA
GGCUCCUUCGGG CCUUCAU CCAC GG UGUCU \
UCGGGGGAGCUC GGAGGUA GGUG CC GCAGA U
AUUUCCGGAGGUACGAUACG^ C C - U CGUCGG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Ebu-Mir-205-P6_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCCUUCAUUCCACCGGUGUCU -21
Get sequence
|
|---|
| Star sequence |
Ebu-Mir-205-P6_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- ACGUCCGUGGCAUGGAGGCCU -57
Get sequence
|
|---|
