MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-338-P3

Family name MIR-338 (all species)
Seed CCAGUGU
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-338-o1  Ebu-Mir-338-o2 
Orthologues Pma-Mir-338-o3  Pma-Mir-338-P3 
Node of Origin (locus) Cyclostomata
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02010050.1: 36039-36101 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUCGAGAAAGAUCUGUCAGCAGCCCUGGGAGCAAAACACAGUAACUGACGAGUCCGCCAUGUCGAUAACUCCAGUGUCUGUGAUUUUGUUCUCCAGUGCUUUGCACAACUGCCUCACUAAGA
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Structure
        10        20           30         40        50        60 
CAUCGAGAAAGAUCUGUCA  --   C    -        -|    UA    AC    CCGCCA 
                   GC  AGC CUGG GAGCAAAA CACAG  ACUG  GAGU      U
                   CG  UCG GACC CUUGUUUU GUGUC  UGAC  CUCA      G
AGAAUCACUCCGUCAACA-  UU   U    U        A^    UG    --    AUAGCU 
 120       110        100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ebu-Mir-338-P3_5p*
mirBase accessionNone
Sequence 
0- AGCAAAACACAGUAACUGACGAGU -24
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Mature sequence

Ebu-Mir-338-P3_3p
mirBase accessionNone
Sequence 
40- UCCAGUGUCUGUGAUUUUGUUCU -63
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