MirGeneDB 3.0
29 microRNA genes with node of origin Cyclostomata
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Ebu-Mir-192-o1 None MIR-192 UGACCUA None None FYBX02009777.1 1718365 1718423 - Cyclostomata Vertebrata No 1
Pma-Mir-192-o1 None MIR-192 UGACCUA None None NC_046074.1 5108757 5108818 + Cyclostomata Vertebrata No 1
Ebu-Mir-194-o1 None MIR-194 GUAACAG None None FYBX02009777.1 1718594 1718650 - Cyclostomata Vertebrata No
Pma-Mir-194-o1 None MIR-194 GUAACAG None None NC_046074.1 5107960 5108016 + Cyclostomata Vertebrata No 1
Pma-Mir-216-P2a1 pma-mir-216b MIR-216 AAUCUCU MIMAT0019527 None NC_046074.1 1955059 1955119 - Cyclostomata Nephrozoa Unknown 1
Ebu-Mir-216-P2a2 None MIR-216 AAUCUCU None None FYBX02005270.1 1704272 1704341 - Cyclostomata Nephrozoa No
Pma-Mir-216-P2a2 None MIR-216 AAUCUCU None None NC_046097.1 6164884 6164943 - Cyclostomata Nephrozoa Unknown 1
Ebu-Mir-216-P2b1 None MIR-216 AAUCUCA None None FYBX02010123.1 688200 688261 + Cyclostomata Nephrozoa Unknown 1
Pma-Mir-216-P2b1 pma-mir-216a MIR-216 AAUCUCA MIMAT0019525 MIMAT0019526 NC_046074.1 1952348 1952411 - Cyclostomata Nephrozoa Unknown
Pma-Mir-217-P1 pma-mir-217a MIR-217 ACUGCAU MIMAT0019528 None NC_046074.1 1950981 1951039 - Cyclostomata Chordata Unknown 1
Ebu-Mir-217-P1-v1 None MIR-217 ACUGCAU None None FYBX02010123.1 688386 688444 + Cyclostomata Chordata Unknown 1
Ebu-Mir-217-P1-v2 None MIR-217 UACUGCA None None FYBX02010123.1 688385 688445 + Cyclostomata Chordata Unknown 1
Ebu-Mir-217-P2-v1 None MIR-217 ACUGCAU None None FYBX02005270.1 1698342 1698399 - Cyclostomata Chordata Unknown 1
Pma-Mir-217-P2-v1 None MIR-217 ACUGCAU None None NC_046097.1 6160240 6160298 - Cyclostomata Chordata Unknown
Ebu-Mir-217-P2-v2 None MIR-217 UACUGCA None None FYBX02005270.1 1698341 1698400 - Cyclostomata Chordata Unknown 1
Pma-Mir-217-P2-v2 None MIR-217 UACUGCA None None NC_046097.1 6160239 6160299 - Cyclostomata Chordata Unknown
Ebu-Mir-338-P3 None MIR-338 CCAGUGU None None FYBX02010050.1 36039 36101 + Cyclostomata Vertebrata No 1
Pma-Mir-338-P3 pma-mir-338b MIR-338 CCAGUGU None MIMAT0019540 NC_046071.1 19740631 19740695 + Cyclostomata Vertebrata No
Ebu-Mir-4542 None MIR-4542 CAAGUGC None None FYBX02010059.1 2027000 2027059 - Cyclostomata Cyclostomata No 1
Pma-Mir-4542 pma-mir-4542 MIR-4542 CAAGUGC MIMAT0019570 MIMAT0019571 NC_046092.1 9705019 9705078 - Cyclostomata Cyclostomata Yes 1
Ebu-Mir-4543 None MIR-4543 AUAGGUC None None FYBX02010165.1 3341649 3341709 + Cyclostomata Cyclostomata No 1 1
Pma-Mir-4543 pma-mir-4543 MIR-4543 AUAGGUC MIMAT0019572 None NC_046098.1 11451420 11451481 - Cyclostomata Cyclostomata Yes 1 1
Ebu-Mir-4544 None MIR-4544 ACCCUAU None None FYBX02009703.1 1475704 1475762 + Cyclostomata Cyclostomata Unknown 1 1 1
Pma-Mir-4544 pma-mir-4544 MIR-4544 ACCCUAU MIMAT0019573 MIMAT0019574 NC_046084.1 9159188 9159246 - Cyclostomata Cyclostomata Yes 1 1
Ebu-Mir-4545-P1-v1 None MIR-4545 ACAGCAU None None FYBX02010063.1 1316499 1316558 - Cyclostomata Cyclostomata No 1
Pma-Mir-4545-P1-v1 pma-mir-4545 MIR-4545 ACAGCAU MIMAT0019575 MIMAT0019576 NC_046071.1 13966325 13966381 + Cyclostomata Cyclostomata Yes 1
Ebu-Mir-4545-P1-v2 None MIR-4545 CAGCAUC None None FYBX02010063.1 1316499 1316558 - Cyclostomata Cyclostomata No 1 1
Pma-Mir-4545-P1-v2 pma-mir-4545 MIR-4545 CAGCAUC MIMAT0019575 MIMAT0019576 NC_046071.1 13966325 13966381 + Cyclostomata Cyclostomata Yes 1 1
Ebu-Mir-4545-P2 None MIR-4545 ACAGCAU None None FYBX02006480.1 741413 741473 + Cyclostomata Cyclostomata No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all