MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-4545-P1-v2

Family name MIR-4545 (all species)
Seed CAGCAUC
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-4545-P1-v1  Ebu-Mir-4545-P2 
Orthologues Pma-Mir-4545-P1-v1  Pma-Mir-4545-P1-v2 
Node of Origin (locus) Cyclostomata
Node of Origin (family) Cyclostomata
Genome context
(Eburgeri_3)		 FYBX02010063.1: 1316499-1316558 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCAUACCUUUCCAGUGCCUCCCAACGUCCUUCACAACUGGCUGCUUUACUGUUCACCUCGCAGGGGUACAGCAUCCAGUUGUGGCGGAUGUGGGGAGAGGCAUCACACUACCAAGUGA
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Structure
        10          20        30        40        50         
GGCCAUACCUUUCCAGUGC--|    A      U          C    U   UGUUCAC 
                     CUCCC ACGUCC UCACAACUGG UGCU UAC       C
                     GAGGG UGUAGG GGUGUUGACC ACGA AUG       U
AGUGAACCAUCACACUACGGA^    G      C          U    C   GGGACGC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
-   +
To
Star sequence

Ebu-Mir-4545-P1-v2_5p*
mirBase accessionNone
Sequence 
0- CUUCACAACUGGCUGCUUUAC -21
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Mature sequence

Ebu-Mir-4545-P1-v2_3p
mirBase accessionNone
Sequence 
39- ACAGCAUCCAGUUGUGGCGGA -60
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