| MirGeneDB ID | Pma-Mir-192-o1 |
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| Family name |
MIR-192 (all species) |
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| Seed |
UGACCUA |
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| Species |
Sea Lamprey (Petromyzon marinus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Ebu-Mir-192-o1
Laf-Mir-192-P1
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| Node of Origin (locus) |
Cyclostomata
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| Node of Origin (family) |
Vertebrata
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Genome context
(GCF_010993605.1_kPetMar1.pri_genomic) |
NC_046074.1: 5108757-5108818 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCAAGUCACCCAAGGCUUCGAGGCCGGGCCUUGACCUAUGAAUUGACAGCCGGUGGCCACCGCAUCUCGCCUGUCAGUUUCACAGGUCAAGCCACGGCCUCCGACCAUUUCCUCGGCCGACC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GCAAGUCACCCAAGGCU- - -| C A - C GUGGCCA
UC GAGGCCG GGC UUGACCU UGAA UUGACAG CG \
AG CUCCGGC CCG AACUGGA ACUU GACUGUC GC C
CCAGCCGGCUCCUUUACC C A^ - C U C UCUACGC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UGUG in loop |
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Tissue expression
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| Br |
Gi |
Gu |
He |
Ki |
La |
Li |
Mo |
Mu |
Sk |
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| Mature sequence |
Pma-Mir-192-o1_5p |
| mirBase accession | None |
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| Sequence |
0- UUGACCUAUGAAUUGACAGCCG -22
Get sequence
|
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| Star sequence |
Pma-Mir-192-o1_3p* |
| mirBase accession | None |
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| Sequence |
39- CCUGUCAGUUUCACAGGUCAAGC -62
Get sequence
|
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