| MirGeneDB ID | Laf-Mir-192-P1 |
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| Family name |
MIR-192 (all species) |
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| Seed |
UGACCUA |
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| Species |
African bush elephant (Loxodonta africana) |
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| MiRBase ID |
|
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| Paralogues |
Laf-Mir-192-P2
|
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| Orthologues |
Ebu-Mir-192-o1
Pma-Mir-192-o1
|
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| Node of Origin (locus) |
Vertebrata
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(GCA_000001905.1_Loxafr3.0) |
GL010101.1: 8120404-8120463 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGCCAUCACUCAGAAACGGUGUACAGGAAAAUGACCUAUGAACUGACAGACAAUAUGGCUAAGUUUGUCUGUCAUUUCUGUAGGCCAACAUUCUGUAUGUCUGCUACUUCAAAGUCAGAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGCCAUCACUCAGAAAC-- GU AAA A -| C AUAUGG
G GUACAGGA UG CCUAU GAA UGACAGACA \
C UAUGUCUU AC GGAUG CUU ACUGUCUGU C
AAGACUGAAACUUCAUCGU UG ACA C U^ U UUGAAU
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Laf-Mir-192-P1_5p (predicted) |
| mirBase accession | None |
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| Sequence |
0- AUGACCUAUGAACUGACAGACA -22
Get sequence
|
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| Star sequence |
Laf-Mir-192-P1_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
37- UCUGUCAUUUCUGUAGGCCAACA -60
Get sequence
|
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