MirGeneDB 2.1

MirGeneDB ID

Ebu-Mir-92-P1e

Family name MIR-92 (all species)
Seed AUUGCAC
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-92-P2e  Ebu-Mir-92-P2f 
Orthologues Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Cel-Mir-92  Esc-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) E. burgeri
Node of Origin (family) Bilateria
Genome context
(Eburgeri_3)
FYBX02010694.1: 1553862-1553920 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGGUUCUUGGUUGAUGUCCCGCCCUGCUAAGGCCUGGAUUGGCUGCAAUGCAUGUGUGUUCAUUUGUAUUGCACUUGUCCCGGCCUCUGUGGGGGUGUUGGGAACUUUCCCACAUCCC
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Structure
        10        20          30        40        50         
GGGGUUCUUGGUUGAUGUCCCG--|  UG UA     U    U  C         UGUGU 
                        CCC  C  AGGCC GGAU GG UGCAAUGCA     G
                        GGG  G  UCCGG CCUG UC ACGUUAUGU     U
CCCUACACCCUUUCAAGGGUUGUG^  GU UC     C    U  -         UUACU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
To
Star sequence

Ebu-Mir-92-P1e_5p* (predicted)

mirBase accessionNone
Sequence
0- AGGCCUGGAUUGGCUGCAAUGCA -23
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Mature sequence

Ebu-Mir-92-P1e_3p

mirBase accessionNone
Sequence
37- UAUUGCACUUGUCCCGGCCUCU -59
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