MirGeneDB 3.0

MirGeneDB ID

Eca-Mir-384

Family name MIR-384 (all species)
Seed GUAAACA
Species Horse (Equus caballus)
MiRBase ID eca-mir-384
Paralogues
Orthologues Cfa-Mir-384  Laf-Mir-384  Mmr-Mir-384  Mmu-Mir-384  Ocu-Mir-384  Rno-Mir-384 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)
CM009179.1: 60255713-60255775 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUUACAGGCAGAAUGUUAAAUCAGGAGUUGUAAACAAUUCCUAGGCAAUGUGUAUAAUGUUUGUAAGUCAUUCCUAGAAAUUGUUCACAAUGCCUGUAACAUAUAUGCAACUAGCAAGAUG
Get precursor sequence
Structure
        10        20          30        40        50        60 
AUGUUACAGGCAGAAUGUUAAAU--|   A     A       C     C    UGUAUAAU 
                         CAGG GUUGU AACAAUU CUAGG AAUG        G
                         GUCC UAACA UUGUUAA GAUCC UUAC        U
GUAGAACGAUCAACGUAUAUACAAU^   G     C       A     -    UGAAUGUU 
 120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Mature sequence

Eca-Mir-384_5p

mirBase accessionNone
Sequence
0- UGUAAACAAUUCCUAGGCAAUGU -23
Get sequence
Co-mature sequence

Eca-Mir-384_3p

mirBase accessionMIMAT0013215
Sequence
41- AUUCCUAGAAAUUGUUCACAAU -63
Get sequence