| MirGeneDB ID | Eca-Mir-384 |
|---|
| Family name |
MIR-384 (all species) |
|---|
| Seed |
GUAAACA |
|---|
| Species |
Horse (Equus caballus) |
|---|
| MiRBase ID |
eca-mir-384
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cfa-Mir-384
Laf-Mir-384
Mmr-Mir-384
Mmu-Mir-384
Ocu-Mir-384
Rno-Mir-384
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCA_002863925.1_EquCab3.0) |
CM009179.1: 60255713-60255775 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUGUUACAGGCAGAAUGUUAAAUCAGGAGUUGUAAACAAUUCCUAGGCAAUGUGUAUAAUGUUUGUAAGUCAUUCCUAGAAAUUGUUCACAAUGCCUGUAACAUAUAUGCAACUAGCAAGAUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AUGUUACAGGCAGAAUGUUAAAU--| A A C C UGUAUAAU
CAGG GUUGU AACAAUU CUAGG AAUG G
GUCC UAACA UUGUUAA GAUCC UUAC U
GUAGAACGAUCAACGUAUAUACAAU^ G C A - UGAAUGUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Eca-Mir-384_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGUAAACAAUUCCUAGGCAAUGU -23
Get sequence
|
|---|
| Co-mature sequence |
Eca-Mir-384_3p |
| mirBase accession | MIMAT0013215 |
|---|
| Sequence |
41- AUUCCUAGAAAUUGUUCACAAU -63
Get sequence
|
|---|
