| MirGeneDB ID | Laf-Mir-384 |
|---|
| Family name |
MIR-384 (all species) |
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| Seed |
GUAAACA |
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| Species |
African bush elephant (Loxodonta africana) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Cfa-Mir-384
Eca-Mir-384
Mmr-Mir-384
Mmu-Mir-384
Ocu-Mir-384
Rno-Mir-384
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(GCA_000001905.1_Loxafr3.0) |
GL010051.1: 24687933-24687995 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
ACCUUACAGGCAGAAUGUUAAAUCAGGAAUUGUAAACAAUUUCUAGGCAAUGUGUAUAAUGUUUAUAAGUCAUUCCUAGAAAUUGUUCACAAUGCCUGUAACAUAUAUGCAACUAGCAAGAUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
ACCUUACAGGCAGAAUGUUAAAU--| A A C UGUAUAAU
CAGG AUUGU AACAAUUUCUAGG AAUG G
GUCC UAACA UUGUUAAAGAUCC UUAC U
GUAGAACGAUCAACGUAUAUACAAU^ G C - UGAAUAUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Laf-Mir-384_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UGUAAACAAUUUCUAGGCAAUGU -23
Get sequence
|
|---|
| Star sequence |
Laf-Mir-384_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
41- AUUCCUAGAAAUUGUUCACAAU -63
Get sequence
|
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