MirGeneDB 3.0

MirGeneDB ID

Ocu-Mir-384

Family name MIR-384 (all species)
Seed GUAAACA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-384
Paralogues
Orthologues Cfa-Mir-384  Eca-Mir-384  Laf-Mir-384  Mmr-Mir-384  Mmu-Mir-384  Rno-Mir-384 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)
chrX: 69021490-69021552 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-384)
Mir-384 chrX: 69021490-69021552 [-] UCSC Ensembl
Mir-325 chrX: 69057718-69057777 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUUACAGGCAGAAUGUUAAAUCAGGAAUUGUAAACAAUUCCUAGGCAAUGUGUAUAAUGUUUGUAAGUCAUUCCUAGAAAUUGUUCACAAUGCCUGUAACAUAUAUGCAACUAGCAACAUA
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Structure
        10        20          30        40        50        60 
AUGUUACAGGCAGAAUGUUAAAU--|   A     A       C     C    UGUAUAAU 
                         CAGG AUUGU AACAAUU CUAGG AAUG        G
                         GUCC UAACA UUGUUAA GAUCC UUAC        U
AUACAACGAUCAACGUAUAUACAAU^   G     C       A     -    UGAAUGUU 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-384_5p

mirBase accessionMIMAT0048431
Sequence
0- UGUAAACAAUUCCUAGGCAAUGU -23
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Star sequence

Ocu-Mir-384_3p*

mirBase accessionMIMAT0048432
Sequence
41- AUUCCUAGAAAUUGUUCACAAU -63
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