MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-2685-P1a

Family name MIR-2685 (all species)
Seed AACUCAG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-2685-P1b  Efe-Mir-2685-P2 
Orthologues Cte-Mir-2685-P1  Pdu-Mir-2685 
Node of Origin (locus) E. fetida
Node of Origin (family) Pleistoannelida
Genome context
(Efe_combined)		 Efet.01.107287: 3378-3440 [+]
Precursor
(pre-Mir +30nt flank)
GUUAGANNNNNNNNNNNNNNNNNNNNGUUGGAGGUGUUUUCUGAAUUGCGUUAUGUUCACUUCACACAGGCAUAACUCAGUCAGACGCCUGUACUGCACUGUCAAAGGCGUGUCAACACGACU
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Structure
        10        20          30        40        50        60   
GUUAGANNNNNNNNNNNNNNNNNNNN  --| G     UUU     A   C       UCACUU 
                          GU  UG AGGUG   UCUGA UUG GUUAUGU      \
                          CG  AU UCCGC   AGACU GAC CAAUACG      C
UCAGCACAACUGUGCGGAAACUGUCA  UC^ G     ---     -   U       GACACA 
 120       110       100        90            80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Efe-Mir-2685-P1a_5p*
mirBase accessionNone
Sequence 
0- GAGGUGUUUUCUGAAUUGCGUUAUGU -26
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Mature sequence

Efe-Mir-2685-P1a_3p
mirBase accessionNone
Sequence 
42- UAACUCAGUCAGACGCCUGUA -63
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