| MirGeneDB ID | Efe-Mir-2707-v1 |
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| Family name |
MIR-2707 (all species) |
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| Seed |
GUCAAGC |
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| Species |
Common brandling worm (Eisenia fetida) |
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| MiRBase ID |
|
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| Paralogues |
Efe-Mir-2707-v2
|
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| Orthologues |
Cte-Mir-2707
Pdu-Mir-2707
|
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| Node of Origin (locus) |
Pleistoannelida
|
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| Node of Origin (family) |
Pleistoannelida
|
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Genome context
(Efe_combined) |
Efet.01.594977: 35-93 [-]
|
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Precursor
(pre-Mir +30nt flank) |
GGCCAUACAUAUGGAUAUGCGUUAGACUUCUGUCAAGCAGAUUAAGUAUUGAUGACAAUCAGUUCAAUACUUAUUCCGCUUCUGGCAGAAGGCUCUCGCUGCUGAACUGCAGCAGCAGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGCCAUACAUAUGGAUAU-- UU A --| A U UGACA
GCG AG CUUCUGUCA AGC GA UAAGUAUUGA \
CGC UC GAAGACGGU UCG CU AUUCAUAACU A
CGACGACGACGUCAAGUCGU UC G CU^ C U UGACU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Efe-Mir-2707-v1_5p |
| mirBase accession | None |
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| Sequence |
0- UGUCAAGCAGAUUAAGUAUUGA -22
Get sequence
|
|---|
| Star sequence |
Efe-Mir-2707-v1_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- AAUACUUAUUCCGCUUCUGGCAGA -59
Get sequence
|
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