MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-9-P21

Family name MIR-9 (all species)
Seed CUUUGGU
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-9-P20 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dgr-Mir-9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)		 Efet.01.1380669: 63-123 [-]
Precursor
(pre-Mir +30nt flank)
NNNNNUGAUGUUGAUGAGAUUUUCUGACUGUCUUUGGUUAUCUAGCUGUAUGAUUGGUUCGAUACGUCAUAAAGCUAGGUUACCGAAGCAAAACGGAAAACGGUUUGCAACUGAUGCGCUG
Get precursor sequence
Structure
        10          20         30        40        50          
NNNNNUGAUGUUGAUGAGA--       AC-| U       U        G     UUGGUU 
                     UUUUCUG   UG CUUUGGU AUCUAGCU UAUGA      \
                     AAAAGGC   AC GAAGCCA UGGAUCGA AUACU      C
GUCGCGUAGUCAACGUUUGGC       AAA^ -       U        A     GCAUAG 
 .       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Efe-Mir-9-P21_5p
mirBase accessionNone
Sequence 
0- UCUUUGGUUAUCUAGCUGUAUGA -23
Get sequence
Star sequence

Efe-Mir-9-P21_3p* (predicted)
mirBase accessionNone
Sequence 
38- AUAAAGCUAGGUUACCGAAGCAA -61
Get sequence