| MirGeneDB ID | Esc-Mir-12499 |
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| Family name |
MIR-12499 (all species) |
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| Seed |
ACACCCG |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Npo-Mir-12499
Obi-Mir-12499
Ovu-Mir-12499
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| Node of Origin (locus) |
Cephalopoda
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| Node of Origin (family) |
Cephalopoda
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-2_pre_SRIE01024612.1:268348-268606: 101-159 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUUUUGAAAGCCCACUCGCGGGAGUCGGCGAACACCCGAGUGAGCGGCUGAGGAUUACGAAAUAUGCCGAGCCCUUACGAGGGUGUUCGUUGACAUUCGUACUUCACAGGGAUAUAUGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUUUUGAAAGCCCACUC--| A GA C GA AUUACG
GCGGG GUCGGCGAACACCC GUGAG GGCU GG \
UGCUU CAGUUGCUUGUGGG CAUUC CCGA CC A
CGUAUAUAGGGACACUUCA^ A AG - G- GUAUAA
110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Esc-Mir-12499_5p |
| mirBase accession | None |
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| Sequence |
0- AACACCCGAGUGAGCGGCUGAGGA -24
Get sequence
|
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| Star sequence |
Esc-Mir-12499_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
36- CCGAGCCCUUACGAGGGUGUUCG -59
Get sequence
|
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