MirGeneDB 3.0

MirGeneDB ID

Npo-Mir-12499

Family name MIR-12499 (all species)
Seed ACACCCG
Species Chambered Nautilus (Nautilus pompilius)
MiRBase ID
Paralogues
Orthologues Esc-Mir-12499  Obi-Mir-12499  Ovu-Mir-12499 
Node of Origin (locus) Cephalopoda
Node of Origin (family) Cephalopoda
Genome context
(GCA_018389105_NPO)
JACATO010000674.1: 15031-15089 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUCCAGGUACUCCAUUCCGACUGGCGCGGAACACCCGAGUGAGCGGCUGAGGAAUACGAUACAUUCCGAGCCCUUACGAGGGUAUUCUGCGCUAGCGAGAAAUCCGGAAGACGGCGUC
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Structure
        10           20        30        40        50          
UAUCCAGGUACUCCAUUC---| A           C    GA     C    GA   AUACG 
                     CG CUGGCGCGGAA ACCC  GUGAG GGCU  GGA     \
                     GC GAUCGCGUCUU UGGG  CAUUC CCGA  CCU     A
CUGCGGCAGAAGGCCUAAAGA^ -           A    AG     -    G-   UACAU 
       110       100         90        80         70
Deep sequencing
3' NTU Unknown
MotifsNo
Mature sequence

Npo-Mir-12499_5p (predicted)

mirBase accessionNone
Sequence
0- AACACCCGAGUGAGCGGCUGAGGA -24
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Star sequence

Npo-Mir-12499_3p* (predicted)

mirBase accessionNone
Sequence
37- CGAGCCCUUACGAGGGUAUUCU -59
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